Official comment
There is no difference in the processing for any of your maps.
a. This is due to a strong sunspot in your images. This is caused by the shadow of the aircraft falling within the field of view of the camera. It is best to collect your data at least 1.5-2 hours off of solar noon for your area. Your images were collected at exactly solar noon and grass is quite reflective in this situation. This is warned against in the Data Collection guidelines that are agreed to at the time of upload.
b. This is a common issue. The elevation is provided as it is created in our system. It may need to be adjusted up or down from the Google Earth surface.
https://support.dronesmadeeasy.com/hc/en-us/community/posts/115000245926-KMZ-file-altitudes
https://support.dronesmadeeasy.com/hc/en-us/community/posts/203524813-Trouble-with-KMZ-files
https://support.dronesmadeeasy.com/hc/en-us/community/posts/205650983-KMZ-files-and-compatability
https://support.dronesmadeeasy.com/hc/en-us/community/posts/206261986-KMZ-and-OBJ-file-questions
https://support.dronesmadeeasy.com/hc/en-us/community/posts/210248183-KMZ-3d-and-google-earth
There isn't really much reason to do the full grid the way you did. It MIGHT turn out better if you just used the images from half of your full grid of images.
Map Pilot Pro would have warned you that the time you were collecting your images was not optimal.