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Bah! I responded to this a while ago but apparently it didn't get posted. Sorry for the delay.
The Map Pilot Pro defaults are 60m and 80/80 overlap. That comes out to roughly 2.5cm/pixel on most cameras and 80% it what we recommend when you care about the elevation related outputs (like volume measurements).
The volume measurements are not going to change much if the GSD is 1 cm/pixel vs being 3 cm/pixel but overlap can affect it more.
It is better to fly higher and use more overlap than the fly lower with less overlap. Given the same number of pictures you are going to get better results with the higher overlap.
As far as the repeatability of your measurements goes you want to be using lots of dots when drawing your measurement polygons. Think 20 to 30, not 4 to 6. This lets it account for uneven surfaces better and makes it so one bad point doesn't drag the whole measurement down.