I am not understanding what you are describing here. There is Map Pilot Pro, which is our data collection app and the DJI app. They are for collecting data. The other software is you named are for processing data. Are you processing your data using Maps Made Easy and you are seeing something different using other software?
Is it really out of scale or is it just offset 2 feet? We process things according to the tags that are provided in the images. if the tags are off, the imagery will be off.
Please provide screenshots to illustrate what you are describing.